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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053113.1 RefSeqGene
- Range
-
5071..133960
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001033551.3 → NP_001028723.1 TOM1-like protein 2 isoform 1
See identical proteins and their annotated locations for NP_001028723.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, BC051650, BM976586
- Consensus CDS
-
CCDS32584.1
- UniProtKB/Swiss-Prot
-
Q6ZVM7
- Related
- ENSP00000464297.1, ENST00000581396.6
- Conserved Domains (2) summary
-
- cd14238
Location:168 → 259
- GAT_TM1L2; GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cl02544
Location:12 → 98
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
-
NM_001082968.2 → NP_001076437.1 TOM1-like protein 2 isoform 3
See identical proteins and their annotated locations for NP_001076437.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK124331, BM976586, DA235267, DA335727
- Consensus CDS
-
CCDS42270.1
- UniProtKB/Swiss-Prot
- B7Z2L7, B7Z7F4, Q6ZVM7, Q86V61, Q8TDE7, Q96M88
- Related
- ENSP00000368818.3, ENST00000379504.8
- Conserved Domains (2) summary
-
- cd14238
Location:218 → 309
- GAT_TM1L2; GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cd16996
Location:12 → 148
- VHS_Tom1L2; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 2
-
NM_001288786.2 → NP_001275715.1 TOM1-like protein 2 isoform 4
See identical proteins and their annotated locations for NP_001275715.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK294846, AK301944, BM976586
- Consensus CDS
-
CCDS74003.1
- UniProtKB/TrEMBL
-
B7Z671
- Related
- ENSP00000438621.1, ENST00000535933.5
- Conserved Domains (2) summary
-
- cd16996
Location:12 → 148
- VHS_Tom1L2; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 2
- cd14238
Location:165 → 256
- GAT_TM1L2; canonical GAT domain found in target of Myb-like protein 2 (Tom1L2)
-
NM_001288787.2 → NP_001275716.1 TOM1-like protein 2 isoform 5
See identical proteins and their annotated locations for NP_001275716.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK301944, BM976586, DA235267
- Consensus CDS
-
CCDS74002.1
- UniProtKB/Swiss-Prot
-
Q6ZVM7
- Related
- ENSP00000312860.10, ENST00000318094.14
- Conserved Domains (2) summary
-
- cd14238
Location:173 → 264
- GAT_TM1L2; canonical GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cl02544
Location:12 → 123
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
-
NM_001288788.2 → NP_001275717.1 TOM1-like protein 2 isoform 6
See identical proteins and their annotated locations for NP_001275717.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK295111, AK301944, BM976586, DA235267
- Consensus CDS
-
CCDS74001.1
- UniProtKB/TrEMBL
- B7Z2U2, B7Z671
- Related
- ENSP00000437655.1, ENST00000540946.5
- Conserved Domains (2) summary
-
- cl02544
Location:12 → 123
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
- cl03906
Location:122 → 211
- GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins
-
NM_001288789.2 → NP_001275718.1 TOM1-like protein 2 isoform 7
See identical proteins and their annotated locations for NP_001275718.1
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK299872, AK301944, BM976586
- Consensus CDS
-
CCDS74000.1
- UniProtKB/TrEMBL
- B7Z671, F5H3S6
- Related
- ENSP00000445188.1, ENST00000542206.5
- Conserved Domains (2) summary
-
- cl02544
Location:12 → 73
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
- cl03906
Location:73 → 161
- GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins
-
NM_001350331.2 → NP_001337260.1 TOM1-like protein 2 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK295111, AK301944, BM976586, DA235267
- Conserved Domains (2) summary
-
- cd14238
Location:173 → 264
- GAT_TM1L2; canonical GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cl02544
Location:12 → 123
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
-
NM_001350332.2 → NP_001337261.1 TOM1-like protein 2 isoform 9
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK294846, BC051650, BM976586
- Conserved Domains (2) summary
-
- cd14238
Location:218 → 309
- GAT_TM1L2; GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cd16996
Location:12 → 148
- VHS_Tom1L2; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 2
-
NM_001350333.2 → NP_001337262.1 TOM1-like protein 2 isoform 10
Status: REVIEWED
- Source sequence(s)
-
AC122129, AK294846, BC051650, BM976586
- Conserved Domains (2) summary
-
- cd14238
Location:218 → 309
- GAT_TM1L2; GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cd16996
Location:12 → 148
- VHS_Tom1L2; VHS (Vps27/Hrs/STAM) domain of TOM1-like protein 2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
17843511..17972400 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047435389.1 → XP_047291345.1 TOM1-like protein 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z671
-
XM_047435386.1 → XP_047291342.1 TOM1-like protein 2 isoform X5
-
XM_011523662.2 → XP_011521964.1 TOM1-like protein 2 isoform X2
- Conserved Domains (2) summary
-
- cd14238
Location:168 → 259
- GAT_TM1L2; GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cl02544
Location:12 → 98
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
-
XM_047435388.1 → XP_047291344.1 TOM1-like protein 2 isoform X7
- UniProtKB/TrEMBL
-
B7Z671
-
XM_005256466.2 → XP_005256523.1 TOM1-like protein 2 isoform X4
See identical proteins and their annotated locations for XP_005256523.1
- UniProtKB/TrEMBL
-
B7Z671
- Conserved Domains (2) summary
-
- cl02544
Location:12 → 123
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
- cl03906
Location:122 → 211
- GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins
-
XM_005256462.2 → XP_005256519.1 TOM1-like protein 2 isoform X1
- Conserved Domains (2) summary
-
- cd14238
Location:173 → 264
- GAT_TM1L2; canonical GAT domain found in target of Myb-like protein 2 (Tom1L2)
- cl02544
Location:12 → 123
- VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily
-
XM_024450589.2 → XP_024306357.1 TOM1-like protein 2 isoform X6
- Conserved Domains (2) summary
-
- cd03565
Location:12 → 152
- VHS_Tom1; VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein. The VHS domain has a superhelical structure similar to the structure of the ARM repeats and is present at the very N-termini of ...
- cl03906
Location:165 → 256
- GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins
-
XM_047435385.1 → XP_047291341.1 TOM1-like protein 2 isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
17790194..17919077 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054315113.1 → XP_054171088.1 TOM1-like protein 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z671
-
XM_054315110.1 → XP_054171085.1 TOM1-like protein 2 isoform X5
-
XM_054315107.1 → XP_054171082.1 TOM1-like protein 2 isoform X2
-
XM_054315112.1 → XP_054171087.1 TOM1-like protein 2 isoform X7
- UniProtKB/TrEMBL
-
B7Z671
-
XM_054315109.1 → XP_054171084.1 TOM1-like protein 2 isoform X4
- UniProtKB/TrEMBL
-
B7Z671
-
XM_054315106.1 → XP_054171081.1 TOM1-like protein 2 isoform X1
-
XM_054315111.1 → XP_054171086.1 TOM1-like protein 2 isoform X6
-
XM_054315108.1 → XP_054171083.1 TOM1-like protein 2 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_144678.3: Suppressed sequence
- Description
- NM_144678.3: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.