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    FOSL2-AS1 FOSL2 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 403150, updated on 17-Sep-2024

    Summary

    Official Symbol
    FOSL2-AS1provided by HGNC
    Official Full Name
    FOSL2 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:55784
    See related
    Ensembl:ENSG00000229951 AllianceGenome:HGNC:55784
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See FOSL2-AS1 in Genome Data Viewer
    Location:
    2p23.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (28384409..28394672, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (28427693..28437964, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (28607276..28617539, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374381 Neighboring gene uncharacterized LOC105374382 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:28582187-28583386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28583785-28584472 Neighboring gene uncharacterized LOC105374383 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28602778-28603278 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28603279-28603779 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11307 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:28615755-28616686 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28616842-28617342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28617343-28617843 Neighboring gene FOS like 2, AP-1 transcription factor subunit Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15515 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28635908-28636512 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28636513-28637117 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28662749-28663248 Neighboring gene uncharacterized LOC102723530 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28674597-28675110 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:28675111-28675624 Neighboring gene small nuclear ribonucleoprotein polypeptide G pseudogene 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_103831.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC104695, AK055918
      Related
      ENST00000427929.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      28384409..28394672 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      28427693..28437964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)