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    OR5M1 olfactory receptor family 5 subfamily M member 1 [ Homo sapiens (human) ]

    Gene ID: 390168, updated on 27-Nov-2024

    Summary

    Official Symbol
    OR5M1provided by HGNC
    Official Full Name
    olfactory receptor family 5 subfamily M member 1provided by HGNC
    Primary source
    HGNC:HGNC:8352
    See related
    Ensembl:ENSG00000255012 AllianceGenome:HGNC:8352
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    OST050; OR11-208
    Summary
    Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
    Orthologs
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    Genomic context

    See OR5M1 in Genome Data Viewer
    Location:
    11q12.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (56609236..56614874, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (56547217..56552848, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (56376712..56382350, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily M member 10 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:56359271-56359772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:56359773-56360272 Neighboring gene olfactory receptor family 5 subfamily M member 13 pseudogene Neighboring gene olfactory receptor family 5 subfamily AM member 1 pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr11:56392173-56392852 Neighboring gene olfactory receptor family 5 subfamily M member 12 pseudogene

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    olfactory receptor 5M1
    Names
    olfactory receptor OR11-208
    seven transmembrane helix receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004740.2NP_001004740.1  olfactory receptor 5M1

      See identical proteins and their annotated locations for NP_001004740.1

      Status: VALIDATED

      Source sequence(s)
      AP002517
      Consensus CDS
      CCDS53631.1
      UniProtKB/Swiss-Prot
      Q6IF60, Q8NGP8, Q96RB6
      UniProtKB/TrEMBL
      A0A126GVL1
      Related
      ENSP00000493124.1, ENST00000641076.1
      Conserved Domains (2) summary
      pfam00001
      Location:41290
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:31308
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      56609236..56614874 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      56547217..56552848 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)