U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FAM47C family with sequence similarity 47 member C [ Homo sapiens (human) ]

    Gene ID: 442444, updated on 27-Nov-2024

    Summary

    Official Symbol
    FAM47Cprovided by HGNC
    Official Full Name
    family with sequence similarity 47 member Cprovided by HGNC
    Primary source
    HGNC:HGNC:25301
    See related
    Ensembl:ENSG00000198173 MIM:301067; AllianceGenome:HGNC:25301
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    This gene encodes a product belonging to a family of proteins with unknown function. The coding sequence of this family member includes several tandemly repeated regions. [provided by RefSeq, Sep 2011]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FAM47C in Genome Data Viewer
    Location:
    Xp21.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (37008366..37011664)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (36604146..36607444)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (37026439..37029737)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:36980637-36981137 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:36981332-36981832 Neighboring gene TFDP1 pseudogene 2 Neighboring gene LanC like family member 3 pseudogene Neighboring gene ferritin heavy chain like 18, pseudogene Neighboring gene ferritin heavy chain 1 pseudogene 29

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021373.1 RefSeqGene

      Range
      5008..8306
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001013736.3NP_001013758.1  putative protein FAM47C

      See identical proteins and their annotated locations for NP_001013758.1

      Status: VALIDATED

      Source sequence(s)
      BX842568
      Consensus CDS
      CCDS35227.1
      UniProtKB/Swiss-Prot
      Q5HY64, Q6ZU46
      Related
      ENSP00000367913.3, ENST00000358047.5
      Conserved Domains (1) summary
      pfam14642
      Location:1257
      FAM47; FAM47 family

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      37008366..37011664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      36604146..36607444
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)