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    LOC9272517 zinc finger protein ZAT8 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9272517, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9272517
    Gene description
    zinc finger protein ZAT8
    Locus tag
    OSNPB_010839100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    ZFP; P0408C03.2
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    Genomic context

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    See LOC9272517 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (36626323..36627192)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (36001214..36002103)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9271642 Neighboring gene coatomer subunit zeta-3-like Neighboring gene protein ALP1-like Neighboring gene protein SOSEKI 5 Neighboring gene uncharacterized LOC4327382

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    zinc finger protein ZAT8
    Names
    C2H2 zinc finger protein
    Os01g0839100
    P0031D11.27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      36626323..36627192
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015779175.3 → XP_015634661.1  zinc finger protein ZAT8

      UniProtKB/TrEMBL
      A0A0P0VA18, A0A979HKG2, A2ZZE6, Q5N9V6, Q5NA09, Q8S9G9
      Conserved Domains (1) summary
      pfam13912
      Location:46 → 69
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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