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    LOC4336033 glutathione hydrolase 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4336033, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4336033
    Gene description
    glutathione hydrolase 1
    Locus tag
    OSNPB_040457500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4336033 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (23349993..23355177, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (22855369..22860994, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene short-chain dehydrogenase PC-15-like Neighboring gene WAT1-related protein At4g01440 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene protein EPIDERMAL PATTERNING FACTOR 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutathione catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutathione hydrolase 1
    Names
    Os04g0457500
    gamma-glutamyltranspeptidase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      23349993..23355177 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778310.3 → XP_015633796.1  glutathione hydrolase 1

      UniProtKB/TrEMBL
      A0A0P0WAX0, A2XU68, Q01JQ0, Q7XV08
      Conserved Domains (1) summary
      PLN02198
      Location:33 → 574
      PLN02198; glutathione gamma-glutamylcysteinyltransferase
    Nucleotide Protein
    Heading Accession and Version

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