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    LOC4341883 non-specific lipid transfer protein GPI-anchored 7 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341883, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4341883
    Gene description
    non-specific lipid transfer protein GPI-anchored 7
    Locus tag
    OSNPB_060686400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4341883 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (29484039..29486874)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (28617452..28620311)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112939392 Neighboring gene auxin response factor 18-like Neighboring gene mitochondrial intermediate peptidase, mitochondrial Neighboring gene uncharacterized LOC4341885

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    non-specific lipid transfer protein GPI-anchored 7
    Names
    Os06g0686400
    P0009H10.51-1
    P0623A10.9-1
    lipid transfer-like protein VAS

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      29484039..29486874
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785465.2 → XP_015640951.1  non-specific lipid transfer protein GPI-anchored 7

      UniProtKB/TrEMBL
      A2YGC8
      Conserved Domains (1) summary
      pfam14368
      Location:20 → 107
      LTP_2; Probable lipid transfer
    Nucleotide Protein
    Heading Accession and Version

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