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    LOC4343822 NADPH HC-toxin reductase 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343822, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4343822
    Gene description
    NADPH HC-toxin reductase 1
    Locus tag
    OSNPB_070601100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1634_B10.127; OJ2013_G04.105
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    Genomic context

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    See LOC4343822 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (24742843..24752829, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (24517984..24528052, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis protein WDR12 homolog Neighboring gene PLASMODESMATA CALLOSE-BINDING PROTEIN 3 Neighboring gene NADPH HC-toxin reductase 1 Neighboring gene 3-oxo-Delta(4,5)-steroid 5-beta-reductase Neighboring gene NADPH HC-toxin reductase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADPH HC-toxin reductase 1; uncharacterized protein LOC4343822
    Names
    Os07g0601100
    putative NADPH HC toxin reductase
    vestitone reductase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      24742843..24752829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066312242.1 → XP_066168339.1  NADPH HC-toxin reductase 1 isoform X4

    2. XM_015791875.3 → XP_015647361.1  NADPH HC-toxin reductase 1 isoform X2

      UniProtKB/TrEMBL
      A0A0P0X8Z8, B8B848, B9FY99, Q7X6N6
      Conserved Domains (1) summary
      cd08958
      Location:4 → 312
      FR_SDR_e; flavonoid reductase (FR), extended (e) SDRs

    3. XM_066312241.1 → XP_066168338.1  uncharacterized protein LOC4343822 isoform X3

    4. XM_026026894.2 → XP_025882679.1  NADPH HC-toxin reductase 1 isoform X1

      UniProtKB/TrEMBL
      B8B848
      Conserved Domains (1) summary
      cl25409
      Location:4 → 317
      SDR; Short-chain dehydrogenases/reductases (SDR)
    Nucleotide Protein
    Heading Accession and Version

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