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    LOC4338037 zinc finger CCCH domain-containing protein 35-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4338037, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4338037
    Gene description
    zinc finger CCCH domain-containing protein 35-like
    Locus tag
    OSNPB_050195200
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OsC3H35; P0473H02.8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (5866975..5869118, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (5846095..5848201, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9266622 Neighboring gene uncharacterized LOC136356537 Neighboring gene transcription factor MYBS3-like Neighboring gene ABC transporter C family member 8 Neighboring gene protein NDL2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger CCCH domain-containing protein 35
    Names
    LOC_Os05g10670
    Protein DELAY OF THE ONSET OF SENESCENCE-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001420246.1 → NP_001407175.1  zinc finger CCCH domain-containing protein 35

      Status: VALIDATED

      Source sequence(s)
      AK063896, CB638947, CI135224, CI146538, CI199361, CI311251, CI610850, CI652511
      UniProtKB/Swiss-Prot
      A0A0P0WJ25, Q6L4N4
      UniProtKB/TrEMBL
      A2Y194

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      5866975..5869118 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6L4N4.1 GenPept UniProtKB/Swiss-Prot:Q6L4N4

    Gene LinkOut

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