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    LOC4342757 serine/arginine-rich splicing factor SR45 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342757, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342757
    Gene description
    serine/arginine-rich splicing factor SR45
    Locus tag
    OSNPB_070227200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4342757 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (7186524..7189747)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (7106973..7110208)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene NAC domain-containing protein 67-like Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene small nucleolar RNA snoR114 Neighboring gene probable serine/threonine-protein kinase PBL21 Neighboring gene KH domain-containing protein SPIN1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor SR45
    Names
    Os07g0227200
    serine/arginine repetitive matrix protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      7186524..7189747
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789339.3 → XP_015644825.1  serine/arginine-rich splicing factor SR45

      UniProtKB/TrEMBL
      B7EK58, Q0D7P4
    Nucleotide Protein
    Heading Accession and Version

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