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    LOC4345028 uncharacterized LOC4345028 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345028, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4345028
    Gene description
    uncharacterized LOC4345028
    Locus tag
    OSNPB_080239000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4345028 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (8477186..8478171)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (8424274..8425417)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene hydrolase pyvD Neighboring gene endo-1,3;1,4-beta-D-glucanase-like Neighboring gene uncharacterized LOC107276716 Neighboring gene endo-1,3;1,4-beta-D-glucanase-like Neighboring gene endo-1,3;1,4-beta-D-glucanase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4345028
    Names
    LYR motif-containing protein 4
    Os08g0239000

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      8477186..8478171
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793573.3 → XP_015649059.1  uncharacterized protein LOC4345028

      UniProtKB/TrEMBL
      A0A0P0XDF5, A2Z744, Q0J724
      Conserved Domains (1) summary
      cd20264
      Location:9 → 77
      Complex1_LYR_LYRM4; LYR (leucine-tyrosine-arginine) motif found in LYR motif-containing protein 4 (LYRM4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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