LOC4329567 cysteine and histidine-rich domain-containing protein RAR1-like [Oryza sativa Japonica Group (Japanese rice)] - Gene

Summary

Gene symbol: LOC4329567
Gene description: cysteine and histidine-rich domain-containing protein RAR1-like
Locus tag: OSNPB_020535400
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Oryza sativa Japonica Group
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as: RAR1; OsRAR1; OJ1112_G07.12
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 2

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_06	current	ASM3414082v1 (GCF_034140825.1)	2	NC_089036.1 (20205409..20208177, complement)
102	previous assembly	IRGSP-1.0 (GCF_001433935.1)	2	NC_029257.1 (19727096..19729887, complement)

Chromosome 2 - NC_089036.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables Hsp90 protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in defense response to bacterium	IEA Inferred from Electronic Annotation more info	PubMed
involved_in defense response to fungus	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: cysteine and histidine-rich domain-containing protein RAR1

Names: B1136H02.25; CHORD domain-containing protein RAR1; LOC_Os02g33180; Protein REQUIRED FOR MLA12 RESISTANCE 1; putative Rar1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001416650.1 → NP_001403579.1 cysteine and histidine-rich domain-containing protein RAR1

Status: VALIDATED

Source sequence(s)

AK111881, AP014958, CA754519, CI372139, CI584705

UniProtKB/TrEMBL

A0A0P0VJX6

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

NC_089036.1 Reference ASM3414082v1 Primary Assembly

Range

20205409..20208177 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_066307015.1 → XP_066163112.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X1
XM_066307017.1 → XP_066163114.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X2

UniProtKB/TrEMBL

A0A0P0VJX6