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    LOC4337138 uncharacterized LOC4337138 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4337138, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4337138
    Gene description
    uncharacterized LOC4337138
    Locus tag
    OSNPB_040636000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4337138 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (32856179..32859438, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (32348491..32351846, complement)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene N-terminal acetyltransferase A complex catalytic subunit NAA10 Neighboring gene small nucleolar RNA Z278 Neighboring gene double-strand break repair protein MRE11-like Neighboring gene probable galacturonosyltransferase 10 Neighboring gene uncharacterized LOC4337140 Neighboring gene uncharacterized LOC112938669

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4337138
    Names
    Os04g0636000
    heterogeneous nuclear ribonucleoprotein U-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      32856179..32859438 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015780182.3 → XP_015635668.1  uncharacterized protein LOC4337138

      UniProtKB/TrEMBL
      A0A0P0WFB3, A0A8J8XGJ2, B9FCR0, Q0J9R0, Q7XQR8
      Conserved Domains (3) summary
      PTZ00395
      Location:449 → 673
      PTZ00395; Sec24-related protein; Provisional
      cd12884
      Location:35 → 226
      SPRY_hnRNP; SPRY domain in heterogeneous nuclear ribonucleoprotein U-like (hnRNP) protein 1
      pfam13671
      Location:260 → 405
      AAA_33; AAA domain
    Nucleotide Protein
    Heading Accession and Version

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