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    LOC4348058 uncharacterized LOC4348058 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348058, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4348058
    Gene description
    uncharacterized LOC4348058
    Locus tag
    OSNPB_100135400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4348058 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (2199986..2202459)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (2191946..2195577)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene small GTPase LIP1 Neighboring gene uncharacterized LOC4348057 Neighboring gene uncharacterized LOC4348059 Neighboring gene caffeoylshikimate esterase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4348058
    Names
    F-box domain-containing protein
    Os10g0135400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      2199986..2202459
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015757393.3 → XP_015612879.1  uncharacterized protein LOC4348058

      UniProtKB/TrEMBL
      A3C2B5, Q0IZ32, Q33B72
      Conserved Domains (1) summary
      pfam12937
      Location:10 → 42
      F-box-like

    2. XM_026020950.2 → XP_025876735.1  uncharacterized protein LOC4348058

      UniProtKB/TrEMBL
      A3C2B5, Q0IZ32, Q33B72
      Conserved Domains (1) summary
      pfam12937
      Location:10 → 42
      F-box-like

    RNA

    1. XR_003239074.2 RNA Sequence

    2. XR_010737044.1 RNA Sequence

    3. XR_001540259.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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