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    LOC4330615 uncharacterized LOC4330615 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330615, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330615
    Gene description
    uncharacterized LOC4330615
    Locus tag
    OSNPB_020730400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4330615 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30921867..30925945)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (30427601..30431741)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene U4/U6 small nuclear ribonucleoprotein Prp31 homolog Neighboring gene potassium transporter 25-like Neighboring gene rRNA-processing protein fcf2 Neighboring gene aluminum-activated malate transporter 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4330615
    Names
    OSJNBa0072H09.38
    Os02g0730400
    P0617A09.17
    putative NHL repeat-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      30921867..30925945
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770133.3 → XP_015625619.2  uncharacterized protein LOC4330615

      UniProtKB/TrEMBL
      A0A0P0VP49, A2X987, Q0DXW1, Q6YWQ3
      Conserved Domains (1) summary
      cl18310
      Location:59 → 231
      NHL; NHL repeat unit of beta-propeller proteins
    Nucleotide Protein
    Heading Accession and Version

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