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    LOC4345777 zinc finger protein 8 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345777, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4345777
    Gene description
    zinc finger protein 8
    Locus tag
    OSNPB_080463500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4345777 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (22894140..22895533)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (22754738..22756136)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4345775 Neighboring gene uncharacterized LOC107282051 Neighboring gene uncharacterized LOC136351598 Neighboring gene protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to gibberellin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in trichome differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in trichome morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 8
    Names
    B1111C03.32
    B1116H04.20
    Os08g0463500
    putative zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      22894140..22895533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794870.3 → XP_015650356.1  zinc finger protein 8

      UniProtKB/TrEMBL
      A2YVZ8, Q6YUB0, Q6Z204
      Conserved Domains (1) summary
      pfam13912
      Location:99 → 124
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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