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    LOC4327992 protein ENHANCED DISEASE RESISTANCE 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4327992, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4327992
    Gene description
    protein ENHANCED DISEASE RESISTANCE 2
    Locus tag
    OSNPB_020102800
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1435_F07.24-1; OJ1435_F07.24-2
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    Genomic context

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    See LOC4327992 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (152791..158888)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (146473..152544)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein SmD3b Neighboring gene uncharacterized LOC136355078 Neighboring gene uncharacterized LOC9269638 Neighboring gene ruBisCO large subunit-binding protein subunit beta, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ENHANCED DISEASE RESISTANCE 2
    Names
    B1370C05.34-1
    B1370C05.34-2
    Os02g0102800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      152791..158888
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769345.3 → XP_015624831.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X2

      UniProtKB/TrEMBL
      A0A0N7KEI7, B9F1P2, Q6YU77
      Conserved Domains (1) summary
      PLN00188
      Location:71 → 780
      PLN00188; enhanced disease resistance protein (EDR2); Provisional

    2. XM_015769344.3 → XP_015624830.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X1

      UniProtKB/TrEMBL
      B9F1P2
      Conserved Domains (1) summary
      PLN00188
      Location:71 → 781
      PLN00188; enhanced disease resistance protein (EDR2); Provisional
    Nucleotide Protein
    Heading Accession and Version

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