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    LOC4342649 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4342649, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4342649
    Gene description
    NAD(P)H-quinone oxidoreductase subunit S, chloroplastic
    Locus tag
    OSNPB_070196200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1715_A07.30
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 7 NC_089041.1 (5277320..5278373, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (5215998..5217094, complement)

    Chromosome 7 - NC_089041.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136357228 Neighboring gene uncharacterized LOC136357227 Neighboring gene putative F-box protein At1g32420 Neighboring gene putative F-box protein At1g50870 Neighboring gene uncharacterized LOC136357262

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in photosynthetic electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAD(P)H-quinone oxidoreductase subunit S, chloroplastic
    Names
    Os07g0196200
    P0589E08.13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089041.1 Reference ASM3414082v1 Primary Assembly

      Range
      5277320..5278373 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015792418.3 → XP_015647904.1  NAD(P)H-quinone oxidoreductase subunit S, chloroplastic

      UniProtKB/TrEMBL
      A2YJ49, A3BHI1, Q6ZDP0
      Conserved Domains (1) summary
      pfam11623
      Location:145 → 196
      NdhS; NAD(P)H dehydrogenase subunit S
    Nucleotide Protein
    Heading Accession and Version

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