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    LOC4350071 dirigent protein 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4350071, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4350071
    Gene description
    dirigent protein 1
    Locus tag
    OSNPB_110214400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4350071 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (6004450..6005440)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (5947245..5948265)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene probable ubiquitin-like-specific protease 2B Neighboring gene dirigent protein 1-like Neighboring gene dirigent protein 1 Neighboring gene dirigent protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    dirigent protein 1
    Names
    Os11g0214400

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      6004450..6005440
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015761020.3 → XP_015616506.1  dirigent protein 1

      UniProtKB/TrEMBL
      A0A8J8YA67, A2ZRZ1, Q0ITV2, Q2R8W3
      Conserved Domains (1) summary
      pfam03018
      Location:40 → 190
      Dirigent; Dirigent-like protein
    Nucleotide Protein
    Heading Accession and Version

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