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    LOC4339497 mitogen-activated protein kinase kinase kinase 18 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339497, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4339497
    Gene description
    mitogen-activated protein kinase kinase kinase 18
    Locus tag
    OSNPB_050545400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (27194131..27195564, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (27075317..27077406, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene PH, RCC1 and FYVE domains-containing protein 1 Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene uncharacterized LOC4339498 Neighboring gene protein ALP1-like Neighboring gene probable auxin efflux carrier component 5a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitogen-activated protein kinase kinase kinase 18
    Names
    Os05g0545400
    mitogen-activated protein kinase kinase kinase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      27194131..27195564 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783192.3 → XP_015638678.1  mitogen-activated protein kinase kinase kinase 18

      UniProtKB/TrEMBL
      A2Y739, B9FHK8
      Conserved Domains (1) summary
      cd06606
      Location:14 → 263
      STKc_MAPKKK; Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase
    Nucleotide Protein
    Heading Accession and Version

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