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    LOC4344616 cysteine-rich repeat secretory protein 55 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4344616, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4344616
    Gene description
    cysteine-rich repeat secretory protein 55
    Locus tag
    OSNPB_080136500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1613_G04.12
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    Genomic context

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    See LOC4344616 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (2071934..2073520, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (2059653..2061625, complement)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein ROC7-like Neighboring gene cysteine-rich repeat secretory protein 55 Neighboring gene cysteine-rich repeat secretory protein 55 Neighboring gene cysteine-rich repeat secretory protein 55

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    cysteine-rich repeat secretory protein 55
    Names
    Os08g0136500
    P0680F05.51
    putative 33-kDa secretory protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      2071934..2073520 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794393.3 → XP_015649879.1  cysteine-rich repeat secretory protein 55

      UniProtKB/TrEMBL
      A2YR06, Q0J852, Q6YYB3
      Conserved Domains (1) summary
      pfam01657
      Location:60 → 138
      Stress-antifung; Salt stress response/antifungal
    Nucleotide Protein
    Heading Accession and Version

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