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    LOC4334905 uncharacterized LOC4334905 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334905, updated on 13-Jul-2024

    Summary

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    Gene symbol
    LOC4334905
    Gene description
    uncharacterized LOC4334905
    Locus tag
    OSNPB_040105100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334905 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 4 NC_089038.1 (337138..340356)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 4 NC_029259.1 (333655..337063)

    Chromosome 4 - NC_089038.1Genomic Context describing neighboring genes Neighboring gene caffeate O-methyltransferase-like protein 2 Neighboring gene zinc finger CCCH domain-containing protein 24 Neighboring gene uncharacterized LOC4334906 Neighboring gene uncharacterized protein C594.04c

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4334905
    Names
    Os04g0105100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089038.1 Reference ASM3414082v1 Primary Assembly

      Range
      337138..340356
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015778229.3 → XP_015633715.1  uncharacterized protein LOC4334905

      UniProtKB/TrEMBL
      A0A5S6R9R9, A2XPJ8, Q0JFG7, Q7X7K6, Q7XXI7
      Conserved Domains (1) summary
      smart00744
      Location:214 → 263
      RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins
    Nucleotide Protein
    Heading Accession and Version

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