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    LOC9268325 probable inactive receptor kinase At2g26730 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9268325, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9268325
    Gene description
    probable inactive receptor kinase At2g26730
    Locus tag
    OSNPB_050588250
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9268325 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (29493293..29497897)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (29307294..29311629)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene protein tesmin/TSO1-like CXC 4 Neighboring gene uncharacterized LOC9269686 Neighboring gene protein PARTING DANCERS homolog Neighboring gene uncharacterized LOC136356702 Neighboring gene bidirectional sugar transporter SWEET5-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable inactive receptor kinase At2g26730
    Names
    Os05g0588250
    Os05g0588300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      29493293..29497897
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015784902.3 → XP_015640388.1  probable inactive receptor kinase At2g26730

      UniProtKB/TrEMBL
      Q6L569
      Conserved Domains (5) summary
      sd00033
      Location:92 → 115
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:24 → 61
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam12799
      Location:138 → 175
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:116 → 174
      LRR_8; Leucine rich repeat
      cl21453
      Location:368 → 633
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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