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    LOC4330544 protein MEI2-like 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330544, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4330544
    Gene description
    protein MEI2-like 2
    Locus tag
    OSNPB_020719800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    ML2; OML2; OJ1008_D06.12-1
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    Genomic context

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    See LOC4330544 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30350920..30359136)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (29859268..29867405)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene anthranilate O-methyltransferase 1 Neighboring gene BAG family molecular chaperone regulator 5, mitochondrial Neighboring gene PHD finger protein At3g20280 Neighboring gene cucumber peeling cupredoxin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PLASTOCHRON2 regulates leaf initiation and maturation in rice. Kawakatsu T, et al. Plant Cell, 2006 Mar. PMID 16461585, Free PMC Article
    2. Large-scale identification of expressed sequence tags involved in rice and rice blast fungus interaction. Jantasuriyarat C, et al. Plant Physiol, 2005 May. PMID 15888683, Free PMC Article
    3. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of meiotic nuclear division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein MEI2-like 2
    Names
    LOC_Os02g48790
    MEI2-like RNA binding protein
    MEI2-like protein 2
    putative meiosis protein mei2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001401958.1 → NP_001388887.1  protein MEI2-like 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AB244277, CB674073, CI082856, CI563679
      UniProtKB/Swiss-Prot
      A0A0P0VNV9, Q6ZI17
      UniProtKB/TrEMBL
      B8AHN0, B9F2E2

    2. NM_001401959.1 → NP_001388888.1  protein MEI2-like 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AB244277, CB674073, CI082856, CI575568, CI602589
      UniProtKB/TrEMBL
      B8AHN0, B9F2E2

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      30350920..30359136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ZI17.1 GenPept UniProtKB/Swiss-Prot:Q6ZI17

    Gene LinkOut

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