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    LOC4339534 uncharacterized LOC4339534 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339534, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4339534
    Gene description
    uncharacterized LOC4339534
    Locus tag
    OSNPB_050551600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339534 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (27582264..27583752)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (27417842..27419094)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene vegetative cell wall protein gp1-like Neighboring gene uncharacterized LOC4339533 Neighboring gene adenylate isopentenyltransferase Neighboring gene CRM-domain containing factor CFM3, chloroplastic/mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4339534
    Names
    COPII coat assembly protein SEC16
    Os05g0551600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      27582264..27583752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015782872.3 → XP_015638358.1  uncharacterized protein LOC4339534

      UniProtKB/TrEMBL
      A0A0P0WQM8, B8AWE9
      Conserved Domains (1) summary
      pfam07797
      Location:151 → 200
      DUF1639; Protein of unknown function (DUF1639)
    Nucleotide Protein
    Heading Accession and Version

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