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    LOC4341880 synaptotagmin-3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4341880, updated on 12-Jul-2024

    Summary

    Gene symbol
    LOC4341880
    Gene description
    synaptotagmin-3
    Locus tag
    OSNPB_060685300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

    See LOC4341880 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (29424850..29430775)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (28558133..28564217)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene COBRA-like protein 10 Neighboring gene uncharacterized LOC9270623 Neighboring gene uncharacterized LOC112939392 Neighboring gene auxin response factor 18-like

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    synaptotagmin-3
    Names
    Os06g0685300
    P0009H10.37
    putative CLB1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      29424850..29430775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015785686.3XP_015641172.1  synaptotagmin-3

      UniProtKB/TrEMBL
      A0A0P0X076, A0A8J8YJZ6, B8B1S1, B9FQJ7
      Conserved Domains (2) summary
      COG5038
      Location:66479
      COG5038; Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
      cl14603
      Location:431537
      C2; C2 domain