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    LOC4325036 uncharacterized LOC4325036 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4325036, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4325036
    Gene description
    uncharacterized LOC4325036
    Locus tag
    OSNPB_010900200
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0035F12.5
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    Genomic context

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    See LOC4325036 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (39791046..39798719)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (39158043..39165719)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354966 Neighboring gene extensin-1 Neighboring gene AP2-like ethylene-responsive transcription factor PLT1 Neighboring gene phospholipase A1 EG1, chloroplastic/mitochondrial Neighboring gene phospholipase A1 EG1, chloroplastic/mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4325036
    Names
    Os01g0900200

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      39791046..39798719
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015765631.3 → XP_015621117.2  uncharacterized protein LOC4325036

      UniProtKB/TrEMBL
      B8A7R3
      Conserved Domains (1) summary
      cd00519
      Location:330 → 546
      Lipase_3; Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of ...
    Nucleotide Protein
    Heading Accession and Version

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