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    LOC4330184 probable enoyl-CoA hydratase 2, mitochondrial [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330184, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4330184
    Gene description
    probable enoyl-CoA hydratase 2, mitochondrial
    Locus tag
    OSNPB_020654100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1003_B06.2
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    Genomic context

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    See LOC4330184 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (26872858..26875891)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (26386491..26389542)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene phospholipase A1-Ibeta2, chloroplastic Neighboring gene probable enoyl-CoA hydratase 2, mitochondrial Neighboring gene uncharacterized LOC136355123 Neighboring gene serine/threonine-protein kinase D6PK Neighboring gene transcription initiation factor TFIID subunit 4b Neighboring gene ubiquitin carboxyl-terminal hydrolase 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable enoyl-CoA hydratase 2, mitochondrial
    Names
    Os02g0654100
    putative enoyl-CoA hydratase
    putative enoyl-CoA hydratase/isomerase YngF

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      26872858..26875891
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066307341.1 → XP_066163438.1  probable enoyl-CoA hydratase 2, mitochondrial isoform X1

      UniProtKB/TrEMBL
      B8AG29

    2. XM_015767746.3 → XP_015623232.1  probable enoyl-CoA hydratase 2, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A0N7KFT1, B8AG29, B9F1F2, Q6H7I3
      Conserved Domains (1) summary
      PLN02600
      Location:50 → 300
      PLN02600; enoyl-CoA hydratase
    Nucleotide Protein
    Heading Accession and Version

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