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    LOC4330559 uncharacterized WD repeat-containing protein C2A9.03 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330559, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330559
    Gene description
    uncharacterized WD repeat-containing protein C2A9.03
    Locus tag
    OSNPB_020721600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1008_D06.31-2
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    Genomic context

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    See LOC4330559 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30426168..30433330, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (29934486..29941663, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112937897 Neighboring gene uncharacterized LOC112937918 Neighboring gene GPI-anchored protein LLG1 Neighboring gene phosphatidylinositol/phosphatidylcholine transfer protein SFH9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized WD repeat-containing protein C2A9.03
    Names
    Os02g0721600
    P0654B04.16-1
    P0654B04.16-2
    WD-40 repeat protein-like
    putative WD-40 repeat protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      30426168..30433330 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015771324.2 → XP_015626810.1  uncharacterized WD repeat-containing protein C2A9.03

      UniProtKB/TrEMBL
      A0A0P0VNT0, Q6Z664
      Conserved Domains (2) summary
      sd00039
      Location:234 → 273
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:256 → 432
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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