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    LOC4332359 LRR receptor-like serine/threonine-protein kinase FEI 1 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332359, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4332359
    Gene description
    LRR receptor-like serine/threonine-protein kinase FEI 1
    Locus tag
    OSNPB_030266800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4332359 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (8877953..8883730)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (8827650..8833529)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene protein ENHANCED DOWNY MILDEW 2 Neighboring gene SH3 domain-containing protein 2 Neighboring gene 17.4 kDa class I heat shock protein-like Neighboring gene 18.1 kDa class I heat shock protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LRR receptor-like serine/threonine-protein kinase FEI 1
    Names
    Os03g0266800

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417478.1 → NP_001404407.1  LRR receptor-like serine/threonine-protein kinase FEI 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AK100780
      UniProtKB/TrEMBL
      B8AKN4, B9F779, Q10NK4

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      8877953..8883730
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775628.2 → XP_015631114.1  LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X1

      Conserved Domains (4) summary
      smart00219
      Location:315 → 579
      TyrKc; Tyrosine kinase, catalytic domain
      sd00033
      Location:77 → 97
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:28 → 68
      LRRNT_2; Leucine rich repeat N-terminal domain
      cl21453
      Location:318 → 582
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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