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    LOC4339033 PWWP domain-containing protein 3 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339033, updated on 16-Jul-2024

    Summary

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    Gene symbol
    LOC4339033
    Gene description
    PWWP domain-containing protein 3
    Locus tag
    OSNPB_050463500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4339033 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (22877705..22882909)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (22764106..22769372)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene protein IQ-DOMAIN 2 Neighboring gene PWWP domain-containing protein 2 Neighboring gene nuclear transcription factor Y subunit B-3-like Neighboring gene E3 ubiquitin-protein ligase UPL4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    PWWP domain-containing protein 3
    Names
    Os05g0463500
    Os05g0463600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      22877705..22882909
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015783815.3 → XP_015639301.1  PWWP domain-containing protein 3

      UniProtKB/TrEMBL
      B9FJJ1
      Conserved Domains (4) summary
      cd05162
      Location:248 → 334
      PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...
      PTZ00121
      Location:873 → 1289
      PTZ00121; MAEBL; Provisional
      PTZ00341
      Location:1136 → 1277
      PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
      cl17169
      Location:776 → 817
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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