U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FEN1A flap endonuclease 1-A-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4339464, updated on 10-Oct-2024

    Summary

    Gene symbol
    FEN1A
    Gene description
    flap endonuclease 1-A-like
    Locus tag
    OSNPB_050540100
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    FEN-1; FEN-1a; FEN-1-A; OsFEN-1; OsFEN-1a; OsJ_19381
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FEN1A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (26948287..26952318, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (26830167..26834255, complement)

    Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein ycf36 Neighboring gene glycosyltransferase family protein 64 protein C5 Neighboring gene uncharacterized protein At4g29660 Neighboring gene chaperonin CPN60-like 2, mitochondrial

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    flap endonuclease 1-A
    Names
    Flap structure-specific endonuclease 1-A
    LOC_Os05g46270
    OSJNBa0052K01.23

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402619.1NP_001389548.1  flap endonuclease 1-A

      Status: VALIDATED

      Source sequence(s)
      AU175084, CB639946, CI178198, CI310112
      UniProtKB/Swiss-Prot
      A0A0P0WQE5, Q0DGD0, Q53WJ9, Q9SXQ6

    RNA

    1. NR_175297.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AU175084, CB639946, CI081629, CI178198, CI310112

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

      Range
      26948287..26952318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)