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    LOC4340367 mitogen-activated protein kinase kinase 5 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4340367, updated on 17-Jul-2024

    Summary

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    Gene symbol
    LOC4340367
    Gene description
    mitogen-activated protein kinase kinase 5
    Locus tag
    OSNPB_060191300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4340367 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (4781019..4782580)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (4616608..4618239)

    Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene DNA-dependent metalloprotease WSS1 Neighboring gene mitogen-activated protein kinase kinase 5 Neighboring gene cytochrome P450 709B2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables MAP kinase kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in MAPK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitogen-activated protein kinase kinase 5
    Names
    OSJNBa0090D06.37-1
    OSJNBa0090D06.37-2
    Os06g0191300
    putative MAP kinase kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

      Range
      4781019..4782580
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015787958.3 → XP_015643444.1  mitogen-activated protein kinase kinase 5

      UniProtKB/TrEMBL
      A0A0N7KLP2, A0A0P0WTS9, Q69TJ7, Q69TJ8
      Conserved Domains (1) summary
      PLN00034
      Location:3 → 329
      PLN00034; mitogen-activated protein kinase kinase; Provisional
    Nucleotide Protein
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