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    LOC4346342 inorganic phosphate transporter 1-6-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4346342, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC4346342
    Gene description
    inorganic phosphate transporter 1-6-like
    Locus tag
    OSNPB_080564000
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    PT6; OsPT6; OsLPT1; PHT1-6; OsLPT6:1; OsPht1;6
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    Genomic context

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    See LOC4346342 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (28392411..28394237)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (28244208..28246046)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor 14-like Neighboring gene uncharacterized LOC136351345 Neighboring gene ABC transporter F family member 1 Neighboring gene ABC transporter B family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning, expression and function of phosphate transporter encoded gene in Oryza sativa L. Ming F, et al. Sci China C Life Sci, 2006 Oct. PMID 17172047
    2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphate ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inorganic phosphate transporter 1-6
    Names
    H(+)/Pi cotransporter
    LOC_Os08g45000
    P0543D10.41
    P0705A05.110
    phosphate transporter
    putative phosphate transporter 6
    putative phosphate transporter OsPT6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001422695.1 → NP_001409624.1  inorganic phosphate transporter 1-6

      Status: VALIDATED

      Source sequence(s)
      AK119787
      UniProtKB/Swiss-Prot
      A0A0P0XIB8, Q8H6H0

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      28392411..28394237
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8H6H0.1 GenPept UniProtKB/Swiss-Prot:Q8H6H0

    Gene LinkOut

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