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    LOC4349970 1-aminocyclopropane-1-carboxylate oxidase [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349970, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4349970
    Gene description
    1-aminocyclopropane-1-carboxylate oxidase
    Locus tag
    OSNPB_110186900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4349970 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (4470780..4473282, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (4415925..4418648, complement)

    Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene probable indole-3-acetic acid-amido synthetase GH3.12 Neighboring gene probable anion transporter 6 Neighboring gene uncharacterized LOC9270524 Neighboring gene uncharacterized LOC136353972

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    1-aminocyclopropane-1-carboxylate oxidase
    Names
    Os11g0186900
    NP_001410105.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423176.1 → NP_001410105.1  1-aminocyclopropane-1-carboxylate oxidase

      Status: VALIDATED

      Source sequence(s)
      AK105491
      UniProtKB/TrEMBL
      A2ZC94, A3C9C8, Q53P53

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

      Range
      4470780..4473282 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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