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    LOC9267037 uncharacterized LOC9267037 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9267037, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC9267037
    Gene description
    uncharacterized LOC9267037
    Locus tag
    OSNPB_120459300
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC9267037 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 12 NC_089046.1 (16538137..16548613)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 12 NC_029267.1 (16092277..16102758)

    Chromosome 12 - NC_089046.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4352178 Neighboring gene spermidine hydroxycinnamoyltransferase 2-like Neighboring gene uncharacterized LOC136354560 Neighboring gene uncharacterized LOC9269225

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC9267037
    Names
    Os12g0459300

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089046.1 Reference ASM3414082v1 Primary Assembly

      Range
      16538137..16548613
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015764796.3 → XP_015620282.1  uncharacterized protein LOC9267037 isoform X2

      Conserved Domains (2) summary
      cd04480
      Location:234 → 321
      RPA1_DBD_A_like; RPA1_DBD_A_like: A subgroup of uncharacterized plant OB folds with similarity to the second OB fold, the ssDNA-binding domain (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the large subunit of Replication protein A (RPA). RPA is a nuclear ...
      cl09930
      Location:356 → 408
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

    2. XM_066306353.1 → XP_066162450.1  uncharacterized protein LOC9267037 isoform X2

    3. XM_015764793.2 → XP_015620279.1  uncharacterized protein LOC9267037 isoform X1

      Conserved Domains (1) summary
      pfam14214
      Location:403 → 566
      Helitron_like_N; Helitron helicase-like domain at N-terminus

    4. XM_066306352.1 → XP_066162449.1  uncharacterized protein LOC9267037 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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