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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029573.2 RefSeqGene
- Range
-
4927..85831
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001243.5 → NP_001234.3 tumor necrosis factor receptor superfamily member 8 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL357835, BC136400, BC141804, M83554
- Consensus CDS
-
CCDS144.1
- UniProtKB/Swiss-Prot
- B1AN79, B9EGD9, D3YTD8, P28908, Q6P4D9
- Related
- ENSP00000263932.2, ENST00000263932.7
- Conserved Domains (1) summary
-
- cd13409
Location:17 → 131
- TNFRSF8; Tumor necrosis factor receptor superfamily member 8 (TNFRSF8), also known as CD30
-
NM_001281430.3 → NP_001268359.2 tumor necrosis factor receptor superfamily member 8 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon, compared to variant 1. The encoded protein (isoform 3) is shorter than isoform 1.
- Source sequence(s)
-
AL357835, BC136400, BC141804, M83554
- Consensus CDS
-
CCDS59989.1
- UniProtKB/Swiss-Prot
-
P28908
- UniProtKB/TrEMBL
-
A5D8T4
- Related
- ENSP00000390650.2, ENST00000417814.3
- Conserved Domains (2) summary
-
- cd13409
Location:62 → 195
- TNFRSF8; Tumor necrosis factor receptor superfamily member 8 (TNFRSF8), also known as CD30
- cl22855
Location:1 → 20
- TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
12063303..12144207
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011542441.4 → XP_011540743.1 tumor necrosis factor receptor superfamily member 8 isoform X1
- Conserved Domains (1) summary
-
- cd13409
Location:17 → 131
- TNFRSF8; Tumor necrosis factor receptor superfamily member 8 (TNFRSF8), also known as CD30
-
XM_047434793.1 → XP_047290749.1 tumor necrosis factor receptor superfamily member 8 isoform X2
-
XM_047434799.1 → XP_047290755.1 tumor necrosis factor receptor superfamily member 8 isoform X3
-
XM_011542443.3 → XP_011540745.1 tumor necrosis factor receptor superfamily member 8 isoform X4
- Conserved Domains (2) summary
-
- cd13409
Location:62 → 195
- TNFRSF8; Tumor necrosis factor receptor superfamily member 8 (TNFRSF8), also known as CD30
- cl22855
Location:1 → 20
- TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
11607442..11688342
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054339680.1 → XP_054195655.1 tumor necrosis factor receptor superfamily member 8 isoform X1
-
XM_054339681.1 → XP_054195656.1 tumor necrosis factor receptor superfamily member 8 isoform X2
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XM_054339682.1 → XP_054195657.1 tumor necrosis factor receptor superfamily member 8 isoform X3
-
XM_054339683.1 → XP_054195658.1 tumor necrosis factor receptor superfamily member 8 isoform X4
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_152942.2: Suppressed sequence
- Description
- NM_152942.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.