NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_012233.1 RefSeqGene
- Range
-
4990..14135
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001161779.2 → NP_001155251.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform 2
See identical proteins and their annotated locations for NP_001155251.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) is the longest transcript. This variant and variant 3 encode the same isoform (2).
- Source sequence(s)
-
AC084346, AK126862, BC098343, BX099681, DA769567
- Consensus CDS
-
CCDS55262.1
- UniProtKB/TrEMBL
-
B4DYX8
- Related
- ENSP00000379503.3, ENST00000396200.3
- Conserved Domains (1) summary
-
- cd00143
Location:134 → 550
- PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
-
NM_001161780.2 → NP_001155252.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform 2
See identical proteins and their annotated locations for NP_001155252.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal segment in the 5' UTR, compared to variant 2. Variants 2 and 3 encode the same isoform 2.
- Source sequence(s)
-
AC084346, AK126862, BC064978, BX099681, DA507397
- Consensus CDS
-
CCDS55262.1
- UniProtKB/TrEMBL
-
B4DYX8
- Conserved Domains (1) summary
-
- cd00143
Location:134 → 550
- PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
-
NM_001161781.2 → NP_001155253.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform 3
See identical proteins and their annotated locations for NP_001155253.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an internal exon, compared to variant 2. The difference causes translation initiation at a downstream AUG and results in an isoform (3) with a shorter N-terminus, compared to isoform 2.
- Source sequence(s)
-
AC084346, AK126862, BX099681, DA240240
- Consensus CDS
-
CCDS6259.1
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
- Conserved Domains (1) summary
-
- cd00143
Location:109 → 525
- PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
-
NM_018444.4 → NP_060914.2 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform 3
See identical proteins and their annotated locations for NP_060914.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an internal segment, compared to variant 2. The difference causes translation initiation at a downstream AUG and results in an isoform (3) with a shorter N-terminus, compared to isoform 2.
- Source sequence(s)
-
AK126862, BC047619, BX099681, DB084539
- Consensus CDS
-
CCDS6259.1
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
- Related
- ENSP00000297598.4, ENST00000297598.5
- Conserved Domains (1) summary
-
- cd00143
Location:109 → 525
- PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
93916923..93926068
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047421905.1 → XP_047277861.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X2
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_047421907.1 → XP_047277863.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
- Related
- ENSP00000428317.1, ENST00000520728.5
-
XM_047421906.1 → XP_047277862.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_017013588.2 → XP_016869077.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X1
- UniProtKB/TrEMBL
-
B4DYX8
-
XM_047421909.1 → XP_047277865.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_047421904.1 → XP_047277860.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X2
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_047421908.1 → XP_047277864.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
- Related
- ENSP00000430380.1, ENST00000517764.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
95042005..95051150
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054360721.1 → XP_054216696.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_054360718.1 → XP_054216693.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X2
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_054360719.1 → XP_054216694.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_054360720.1 → XP_054216695.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
- UniProtKB/Swiss-Prot
- B3KX71, J3KPU0, Q5U5K1, Q9P0J1
- UniProtKB/TrEMBL
-
B3KPZ7
-
XM_054360717.1 → XP_054216692.1 pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X1
- UniProtKB/TrEMBL
-
B4DYX8
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001161778.1: Suppressed sequence
- Description
- NM_001161778.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.