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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001131028.2 → NP_001124500.1 ubiquitin-like-conjugating enzyme ATG10
See identical proteins and their annotated locations for NP_001124500.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) is the longer transcript. Both variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AC010598, AC114969, AI436652, AK225969, AL136912
- Consensus CDS
-
CCDS4057.1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
- Related
- ENSP00000404938.3, ENST00000458350.7
- Conserved Domains (1) summary
-
- pfam03987
Location:100 → 167
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
NM_031482.5 → NP_113670.1 ubiquitin-like-conjugating enzyme ATG10
See identical proteins and their annotated locations for NP_113670.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 5' UTR, as compared to variant 1.
- Source sequence(s)
-
AC010598, AC114969, AI436652, AK225969, BC029268
- Consensus CDS
-
CCDS4057.1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
- Related
- ENSP00000282185.3, ENST00000282185.8
- Conserved Domains (1) summary
-
- pfam03987
Location:100 → 167
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
81972023..82256133
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417800.1 → XP_047273756.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_047417803.1 → XP_047273759.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_017009944.2 → XP_016865433.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
- Conserved Domains (1) summary
-
- pfam03987
Location:64 → 131
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
XM_005248612.4 → XP_005248669.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
- Conserved Domains (1) summary
-
- pfam03987
Location:64 → 131
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
XM_047417798.1 → XP_047273754.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_047417802.1 → XP_047273758.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_005248611.6 → XP_005248668.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
See identical proteins and their annotated locations for XP_005248668.1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
- Conserved Domains (1) summary
-
- pfam03987
Location:100 → 167
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
XM_047417799.1 → XP_047273755.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
- Related
- ENSP00000425225.1, ENST00000513634.1
-
XM_005248610.6 → XP_005248667.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
See identical proteins and their annotated locations for XP_005248667.1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
- Conserved Domains (1) summary
-
- pfam03987
Location:100 → 167
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
XM_047417801.1 → XP_047273757.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_011543660.3 → XP_011541962.1 ubiquitin-like-conjugating enzyme ATG10 isoform X3
- Conserved Domains (1) summary
-
- pfam03987
Location:58 → 125
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
-
XM_011543661.3 → XP_011541963.1 ubiquitin-like-conjugating enzyme ATG10 isoform X4
- Conserved Domains (1) summary
-
- pfam03987
Location:30 → 97
- Autophagy_act_C; Autophagocytosis associated protein, active-site domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
82456197..82741920
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054353610.1 → XP_054209585.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353615.1 → XP_054209590.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353612.1 → XP_054209587.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353611.1 → XP_054209586.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353606.1 → XP_054209581.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353614.1 → XP_054209589.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353608.1 → XP_054209583.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353609.1 → XP_054209584.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353607.1 → XP_054209582.1 ubiquitin-like-conjugating enzyme ATG10 isoform X1
- UniProtKB/Swiss-Prot
- B2RE09, Q6PIX1, Q9H0Y0, Q9H842
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353613.1 → XP_054209588.1 ubiquitin-like-conjugating enzyme ATG10 isoform X2
- UniProtKB/TrEMBL
-
D6RDX3
-
XM_054353616.1 → XP_054209591.1 ubiquitin-like-conjugating enzyme ATG10 isoform X3
-
XM_054353617.1 → XP_054209592.1 ubiquitin-like-conjugating enzyme ATG10 isoform X4