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    Gm39559 predicted gene, 39559 [ Mus musculus (house mouse) ]

    Gene ID: 105243774, updated on 22-Oct-2024

    Summary

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    Official Symbol
    Gm39559provided by MGI
    Official Full Name
    predicted gene, 39559provided by MGI
    Primary source
    MGI:MGI:5622444
    See related
    Ensembl:ENSMUSG00000143016 AllianceGenome:MGI:5622444
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm39559 in Genome Data Viewer
    Location:
    12 F2; 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (117309173..117311615)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type N polypeptide 2 Neighboring gene STARR-seq mESC enhancer starr_33420 Neighboring gene predicted gene, 53773 Neighboring gene predicted gene 5441 Neighboring gene microRNA 153 Neighboring gene STARR-positive B cell enhancer mm9_chr12:118623787-118624087 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:118685906-118686089 Neighboring gene predicted gene, 31482 Neighboring gene STARR-positive B cell enhancer ABC_E4048 Neighboring gene Rap guanine nucleotide exchange factor (GEF) 5 Neighboring gene STARR-seq mESC enhancer starr_33424 Neighboring gene STARR-seq mESC enhancer starr_33425 Neighboring gene predicted gene, 53774

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000078.7 Chromosome 12 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      117309173..117311615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004937822.1 RNA Sequence

      Related
      ENSMUST00000374388.1

    2. XR_004937821.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials