U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LINC02367 long intergenic non-protein coding RNA 2367 [ Homo sapiens (human) ]

    Gene ID: 101930452, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC02367provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2367provided by HGNC
    Primary source
    HGNC:HGNC:53290
    See related
    Ensembl:ENSG00000260423 AllianceGenome:HGNC:53290
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 4.5), skin (RPKM 0.6) and 2 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LINC02367 in Genome Data Viewer
    Location:
    12p13.31
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (9367464..9397617)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (9350114..9380238)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (9520060..9550213)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:9435851-9436699 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:9442077-9442928 Neighboring gene DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like Neighboring gene uncharacterized LOC105369649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5940 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5941 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4225 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:9517085-9517601 Neighboring gene uncharacterized LOC101928030 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:9531319-9531821 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:9555514-9556155 Neighboring gene ovostatin homolog 2 Neighboring gene uncharacterized LOC105369647 Neighboring gene uncharacterized LOC124902873 Neighboring gene DEAD/H-box helicase 12, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_120479.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC009533, AC137766
      Related
      ENST00000567749.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      9367464..9397617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187587.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      1..737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      9350114..9380238
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)