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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050574.1 RefSeqGene
- Range
-
4910..44033
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001303136.2 → NP_001290065.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice acceptor compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
BC052263, CR936873, Z97832
- UniProtKB/Swiss-Prot
-
Q8IX30
- Conserved Domains (6) summary
-
- smart00179
Location:356 → 397
- EGF_CA; Calcium-binding EGF-like domain
- cd00041
Location:803 → 914
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam07699
Location:695 → 742
- GCC2_GCC3; GCC2 and GCC3
- pfam12947
Location:33 → 68
- EGF_3; EGF domain
- pfam14670
Location:239 → 274
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl00057
Location:312 → 348
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
NM_152753.4 → NP_689966.2 signal peptide, CUB and EGF-like domain-containing protein 3 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF452494, BC052263, CR936873, Z97832
- Consensus CDS
-
CCDS4800.1
- UniProtKB/Swiss-Prot
- A8K5A3, Q5CZB3, Q86UZ9, Q8IX30, Q8NAU9
- Related
- ENSP00000274938.7, ENST00000274938.8
- Conserved Domains (6) summary
-
- smart00179
Location:357 → 398
- EGF_CA; Calcium-binding EGF-like domain
- cd00041
Location:804 → 915
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam07699
Location:696 → 743
- Ephrin_rec_like; Putative ephrin-receptor like
- pfam12947
Location:33 → 68
- EGF_3; EGF domain
- pfam14670
Location:240 → 275
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl00057
Location:313 → 349
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
35213956..35253079
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005248943.2 → XP_005249000.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1
- UniProtKB/Swiss-Prot
-
Q8IX30
- Conserved Domains (6) summary
-
- smart00179
Location:373 → 414
- EGF_CA; Calcium-binding EGF-like domain
- cd00041
Location:820 → 931
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam07699
Location:712 → 759
- GCC2_GCC3; GCC2 and GCC3
- pfam12947
Location:33 → 68
- EGF_3; EGF domain
- pfam14670
Location:256 → 291
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl00057
Location:329 → 365
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_005248947.2 → XP_005249004.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X3
- Conserved Domains (6) summary
-
- smart00179
Location:373 → 414
- EGF_CA; Calcium-binding EGF-like domain
- cd00041
Location:766 → 877
- CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
- pfam07699
Location:658 → 705
- GCC2_GCC3; GCC2 and GCC3
- pfam12947
Location:33 → 68
- EGF_3; EGF domain
- pfam14670
Location:256 → 291
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl00057
Location:329 → 365
- vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
-
XM_047418383.1 → XP_047274339.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X4
-
XM_047418382.1 → XP_047274338.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
35037034..35076159
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054354663.1 → XP_054210638.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1
-
XM_054354665.1 → XP_054210640.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X3
-
XM_054354666.1 → XP_054210641.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X4
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XM_054354664.1 → XP_054210639.1 signal peptide, CUB and EGF-like domain-containing protein 3 isoform X2