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    FAM86HP family with sequence similarity 86 member H, pseudogene [ Homo sapiens (human) ]

    Gene ID: 729375, updated on 17-Jun-2024

    Summary

    Official Symbol
    FAM86HPprovided by HGNC
    Official Full Name
    family with sequence similarity 86 member H, pseudogeneprovided by HGNC
    Gene description
    family with sequence similarity 86, member A pseudogene
    Primary source
    HGNC:HGNC:42359
    See related
    Ensembl:ENSG00000291081 AllianceGenome:HGNC:42359
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in endometrium (RPKM 2.7), ovary (RPKM 2.0) and 24 other tissues See more
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    Genomic context

    See FAM86HP in Genome Data Viewer
    Location:
    3q22.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (130097782..130111433, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (132841625..132855275, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (129816625..129830276, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene EVA1C pseudogene 6 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:129775360-129776355 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:129776356-129777350 Neighboring gene ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2 Neighboring gene long intergenic non-protein coding RNA 2014 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20519 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:129815614-129816445 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:129818109-129818938 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20520 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20521 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14731 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14732 Neighboring gene uncharacterized LOC124909432 Neighboring gene long intergenic non-protein coding RNA 2021 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:129857063-129857830 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:129871903-129872656 Neighboring gene uncharacterized LOC107986131

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024252.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AC083906, DA296336
      Related
      ENST00000693359.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      130097782..130111433 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      132841625..132855275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)