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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021412.2 RefSeqGene
- Range
-
4979..63297
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001185063.2 → NP_001171992.1 zinc finger protein 75D isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks two in-frame exons, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AK091687, AL832801, CB241691, DA412890
- Consensus CDS
-
CCDS55503.1
- UniProtKB/Swiss-Prot
-
P51815
- Related
- ENSP00000359800.1, ENST00000370764.1
- Conserved Domains (5) summary
-
- COG5048
Location:283 → 397
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:300 → 320
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:270 → 292
- zf-C2H2; Zinc finger, C2H2 type
- pfam01352
Location:139 → 180
- KRAB; KRAB box
- pfam02023
Location:45 → 133
- SCAN; SCAN domain
-
NM_007131.5 → NP_009062.2 zinc finger protein 75D isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AL450472, AL831984, AL832801, BC029787
- Consensus CDS
-
CCDS14648.1
- UniProtKB/Swiss-Prot
- A6NK62, B3KRI7, P51815, Q5JPG0, Q6LDE0
- Related
- ENSP00000359802.3, ENST00000370766.8
- Conserved Domains (5) summary
-
- COG5048
Location:378 → 492
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:395 → 415
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:365 → 387
- zf-C2H2; Zinc finger, C2H2 type
- pfam01352
Location:234 → 275
- KRAB; KRAB box
- pfam02023
Location:45 → 133
- SCAN; SCAN domain
RNA
-
NR_110381.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences compared to variant 1, including containing three alternate 3' exons. This variant is represented as non-coding because it lacks the entire coding region found in variant 1.
- Source sequence(s)
-
AI264634, AL450472, AL831984, BC029787, CF530049
- Related
-
ENST00000494295.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
135248589..135344109 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047442487.1 → XP_047298443.1 zinc finger protein 75D isoform X3
-
XM_047442485.1 → XP_047298441.1 zinc finger protein 75D isoform X1
- UniProtKB/Swiss-Prot
- A6NK62, B3KRI7, P51815, Q5JPG0, Q6LDE0
-
XM_047442486.1 → XP_047298442.1 zinc finger protein 75D isoform X2
-
XM_011531397.4 → XP_011529699.1 zinc finger protein 75D isoform X4
- Conserved Domains (6) summary
-
- smart00349
Location:64 → 109
- KRAB; krueppel associated box
- COG5048
Location:207 → 321
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:224 → 244
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:194 → 216
- zf-C2H2; Zinc finger, C2H2 type
- pfam01352
Location:64 → 103
- KRAB; KRAB box
- pfam13465
Location:267 → 289
- zf-H2C2_2; Zinc-finger double domain
-
XM_005262471.4 → XP_005262528.1 zinc finger protein 75D isoform X5
- Conserved Domains (6) summary
-
- smart00349
Location:28 → 73
- KRAB; krueppel associated box
- COG5048
Location:171 → 285
- COG5048; FOG: Zn-finger [General function prediction only]
- sd00017
Location:188 → 208
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:158 → 180
- zf-C2H2; Zinc finger, C2H2 type
- pfam01352
Location:28 → 67
- KRAB; KRAB box
- pfam13465
Location:231 → 253
- zf-H2C2_2; Zinc-finger double domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
133574408..133670458 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327803.1 → XP_054183778.1 zinc finger protein 75D isoform X1
- UniProtKB/Swiss-Prot
- A6NK62, B3KRI7, P51815, Q5JPG0, Q6LDE0
-
XM_054327805.1 → XP_054183780.1 zinc finger protein 75D isoform X3
-
XM_054327804.1 → XP_054183779.1 zinc finger protein 75D isoform X2
-
XM_054327806.1 → XP_054183781.1 zinc finger protein 75D isoform X4
-
XM_054327807.1 → XP_054183782.1 zinc finger protein 75D isoform X5