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    EOLA2-DT EOLA2 divergent transcript [ Homo sapiens (human) ]

    Gene ID: 100272228, updated on 17-Sep-2024

    Summary

    Official Symbol
    EOLA2-DTprovided by HGNC
    Official Full Name
    EOLA2 divergent transcriptprovided by HGNC
    Primary source
    HGNC:HGNC:48579
    See related
    Ensembl:ENSG00000235703 AllianceGenome:HGNC:48579
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC00894
    Expression
    Ubiquitous expression in prostate (RPKM 4.2), thyroid (RPKM 3.9) and 25 other tissues See more
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    Genomic context

    See EOLA2-DT in Genome Data Viewer
    Location:
    Xq28
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (149938548..150016787)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (148206174..148284407)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (149106766..149185018)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene MAGEA8 antisense RNA 1 Neighboring gene MAGE family member A8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21047 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21049 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21048 Neighboring gene heat shock transcription factor family, X-linked member 4 Neighboring gene endothelium and lymphocyte associated ASCH domain 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149289377-149289876 Neighboring gene nucleolar protein 11 pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385283-149385784 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:149385785-149386284 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149387913-149388449 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149393501-149394088 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:149394089-149394674 Neighboring gene microRNA 2114

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • long intergenic non-protein coding RNA 894

    Clone Names

    • FLJ30251, FLJ44451

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027456.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC244099, BC032484, DA306809
      Related
      ENST00000444489.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      149938548..150016787
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060947.1 Alternate T2T-CHM13v2.0

      Range
      148206174..148284407
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)