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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001190707.2 → NP_001177636.1 ALS2 C-terminal-like protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AC134504, AK126505, AK131270, DA242202, DB350037
- Consensus CDS
-
CCDS2743.1
- UniProtKB/Swiss-Prot
- Q32MA1, Q60I27, Q6AI56, Q6ZNC5, Q6ZNC7, Q6ZTL4, Q86YD2, Q8N9U1, Q8NAL7
- Related
- ENSP00000413223.1, ENST00000415953.5
- Conserved Domains (4) summary
-
- COG4642
Location:358 → 519
- COG4642; Uncharacterized conserved protein [Function unknown]
- pfam02204
Location:834 → 938
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam02493
Location:358 → 378
- MORN; MORN repeat
- cl17171
Location:223 → 321
- PH-like; Pleckstrin homology-like domain
-
NM_147129.5 → NP_667340.2 ALS2 C-terminal-like protein isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the same isoform (1) as variant 2.
- Source sequence(s)
-
AB107015, AC134504, AK126505, DB350037
- Consensus CDS
-
CCDS2743.1
- UniProtKB/Swiss-Prot
- Q32MA1, Q60I27, Q6AI56, Q6ZNC5, Q6ZNC7, Q6ZTL4, Q86YD2, Q8N9U1, Q8NAL7
- Related
- ENSP00000313670.4, ENST00000318962.9
- Conserved Domains (4) summary
-
- COG4642
Location:358 → 519
- COG4642; Uncharacterized conserved protein [Function unknown]
- pfam02204
Location:834 → 938
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam02493
Location:358 → 378
- MORN; MORN repeat
- cl17171
Location:223 → 321
- PH-like; Pleckstrin homology-like domain
RNA
-
NR_033815.3 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC134504, AK126505, AL832132, DB350037
-
NR_135622.2 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC104304, AC134504
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
46668995..46693679 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
46685103..46709793 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_182774.1: Suppressed sequence
- Description
- NM_182774.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
-
NM_182775.2: Suppressed sequence
- Description
- NM_182775.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.