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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001199659.3 → NP_001186588.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 1
See identical proteins and their annotated locations for NP_001186588.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform (1).
- Source sequence(s)
-
AC087623, AY173945, BC069830
- Consensus CDS
-
CCDS56534.1
- UniProtKB/TrEMBL
-
B4DY93
- Related
- ENSP00000428765.2, ENST00000523983.6
- Conserved Domains (1) summary
-
- pfam07766
Location:77 → 331
- LETM1; LETM1-like protein
-
NM_001199660.3 → NP_001186589.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 3
See identical proteins and their annotated locations for NP_001186589.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (3) is shorter at the N-terminus compared to isoform 1. Variants 3 and 4 enocode the same isoform (3).
- Source sequence(s)
-
AC087623, BC024250, BC069830
- Conserved Domains (1) summary
-
- pfam07766
Location:1 → 182
- LETM1; LETM1-like protein
-
NM_001286787.2 → NP_001273716.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 3
See identical proteins and their annotated locations for NP_001273716.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses two alternate splice sites in the 5' UTR which results in the use of a downstream start codon compared to variant 1. The encoded isoform (3) has a shorter N-terminus compared to isoform 1. Variants 3 and 4 enocode the same isoform (3).
- Source sequence(s)
-
AC087623, BC069830
- Conserved Domains (1) summary
-
- pfam07766
Location:1 → 182
- LETM1; LETM1-like protein
-
NM_001286819.2 → NP_001273748.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 4
See identical proteins and their annotated locations for NP_001273748.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses two alternate splice sites in the coding region which results in the use of an upstream AUG, compared to variant 1. The encoded isoform (4) has a longer N-terminus compared to isoform 1.
- Source sequence(s)
-
AC087623
- Consensus CDS
-
CCDS69466.1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Related
- ENSP00000369291.4, ENST00000379957.9
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
NM_001286821.2 → NP_001273750.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 5
See identical proteins and their annotated locations for NP_001273750.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in both UTR's and the coding region and uses an alternate start codon, compared to variant 1. This results in an isoform (5) that is shorter and has distinct N- and C-termini, compared to isoform 1.
- Source sequence(s)
-
AC087623, AK289944, AL832241
- Consensus CDS
-
CCDS75731.1
- UniProtKB/TrEMBL
- A8K1M9, E5RIY3, E5RK40
- Related
- ENSP00000429269.2, ENST00000519476.6
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 167
- LETM1; LETM1-like protein
-
NM_001330515.2 → NP_001317444.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC087623, BC069830, BJ989830, CB242043, CV024670
- Consensus CDS
-
CCDS83282.1
- UniProtKB/TrEMBL
- B4DY93, E9PMA4
- Related
- ENSP00000431211.1, ENST00000524874.5
-
NM_001363204.1 → NP_001350133.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 7 precursor
Status: VALIDATED
- Source sequence(s)
-
AC087623, BC069830
- Conserved Domains (1) summary
-
- pfam07766
Location:2 → 204
- LETM1; LETM1-like protein
-
NM_001363205.1 → NP_001350134.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC087623, BC069830, BP198673
- Conserved Domains (1) summary
-
- pfam07766
Location:1 → 182
- LETM1; LETM1-like protein
-
NM_144652.4 → NP_653253.1 LETM1 domain-containing protein LETM2, mitochondrial isoform 2
See identical proteins and their annotated locations for NP_653253.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC087623, AK058138, BC069830
- Consensus CDS
-
CCDS6106.1
- UniProtKB/TrEMBL
-
B4DY93
- Related
- ENSP00000297720.5, ENST00000297720.9
- Conserved Domains (1) summary
-
- pfam07766
Location:77 → 283
- LETM1; LETM1-like protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
38382431..38409527
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017013056.2 → XP_016868545.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_017013053.2 → XP_016868542.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_047421383.1 → XP_047277339.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X2
-
XM_011544408.3 → XP_011542710.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X3
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_017013051.2 → XP_016868540.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_017013055.2 → XP_016868544.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_017013052.2 → XP_016868541.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_017013054.2 → XP_016868543.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
- UniProtKB/TrEMBL
-
B4DY93
- Conserved Domains (1) summary
-
- pfam07766
Location:124 → 378
- LETM1; LETM1-like protein
-
XM_011544410.3 → XP_011542712.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X4
See identical proteins and their annotated locations for XP_011542712.1
- UniProtKB/Swiss-Prot
-
Q2VYF4
- Related
- ENSP00000434867.1, ENST00000527710.5
- Conserved Domains (1) summary
-
- pfam07766
Location:2 → 164
- LETM1; LETM1-like protein
RNA
-
XR_007060702.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
38659474..38686498
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054359786.1 → XP_054215761.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359781.1 → XP_054215756.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359787.1 → XP_054215762.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X2
-
XM_054359788.1 → XP_054215763.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X3
-
XM_054359785.1 → XP_054215760.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359784.1 → XP_054215759.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359783.1 → XP_054215758.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359782.1 → XP_054215757.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X1
- UniProtKB/Swiss-Prot
- A6NMG3, Q2VYF4, Q8NCR2, Q96LL1
-
XM_054359789.1 → XP_054215764.1 LETM1 domain-containing protein LETM2, mitochondrial isoform X4
RNA
-
XR_008487809.1 RNA Sequence