NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029577.1 RefSeqGene
- Range
-
5440..17572
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001318186.2 → NP_001305115.1 heterogeneous nuclear ribonucleoprotein K isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks an alternate in-frame exon in the coding region and uses an alternate acceptor splice site at the last coding exon compared to transcript variant 1. It encodes isoform c, which is shorter and has a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AB209562, AK300744, AL354733, BU736090, DC318847
- Consensus CDS
-
CCDS94425.1
- UniProtKB/TrEMBL
- A0A994J4E9, B4DUQ1
- Related
- ENSP00000515626.1, ENST00000704013.1
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:120 → 189
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:363 → 436
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
-
NM_001318187.2 → NP_001305116.1 heterogeneous nuclear ribonucleoprotein K isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and lacks an alternate in-frame exon in the coding region compared to transcript variant 1. It encodes isoform d, which is shorter than isoform a.
- Source sequence(s)
-
AB209562, AL354733, BU736090, DC318847
- Consensus CDS
-
CCDS94426.1
- UniProtKB/TrEMBL
-
A0A994J4E9
- Related
- ENSP00000409456.2, ENST00000457156.6
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:120 → 189
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:363 → 436
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
-
NM_001318188.2 → NP_001305117.1 heterogeneous nuclear ribonucleoprotein K isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and uses an alternate acceptor splice site at the last coding exon compared to transcript variant 1. This results in a frame-shift and an isoform (b) with a distinct C-terminus compared to isoform a. Transcript variants 3 and 4 encode the same isoform (b).
- Source sequence(s)
-
AB209562, BC025321, BU736090, DC318847
- Consensus CDS
-
CCDS6667.1
- UniProtKB/Swiss-Prot
- P61978, Q07244, Q15671, Q59F98, Q5T6W4, Q60577, Q6IBN1, Q922Y7, Q96J62
- UniProtKB/TrEMBL
-
A0A994J782
- Related
- ENSP00000353552.5, ENST00000360384.9
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:144 → 213
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:387 → 460
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
-
NM_002140.5 → NP_002131.2 heterogeneous nuclear ribonucleoprotein K isoform a
See identical proteins and their annotated locations for NP_002131.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a). Transcript variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AB209562, BC000355, BU736090, DC428989
- Consensus CDS
-
CCDS6668.1
- UniProtKB/TrEMBL
-
Q5EC54
- Related
- ENSP00000365458.4, ENST00000376281.8
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:144 → 213
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:387 → 460
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
-
NM_031262.4 → NP_112552.1 heterogeneous nuclear ribonucleoprotein K isoform b
See identical proteins and their annotated locations for NP_112552.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate acceptor splice site at the last coding exon compared to transcript variant 1. This results in a frame-shift and an isoform (b) with a distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AB209562, BC014980, BU736090, DC428989
- Consensus CDS
-
CCDS6667.1
- UniProtKB/Swiss-Prot
- P61978, Q07244, Q15671, Q59F98, Q5T6W4, Q60577, Q6IBN1, Q922Y7, Q96J62
- UniProtKB/TrEMBL
-
A0A994J782
- Related
- ENSP00000515623.1, ENST00000704010.1
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:144 → 213
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:387 → 460
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
-
NM_031263.4 → NP_112553.1 heterogeneous nuclear ribonucleoprotein K isoform a
See identical proteins and their annotated locations for NP_112553.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate 5' non-coding exon, hence has a different 5' UTR compared to transcript variant 1. Transcript variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AB209562, BC000355, BU736090, DC318847
- Consensus CDS
-
CCDS6668.1
- UniProtKB/TrEMBL
-
Q5EC54
- Related
- ENSP00000365439.3, ENST00000376263.8
- Conserved Domains (4) summary
-
- pfam08067
Location:4 → 43
- ROKNT; ROKNT (NUC014) domain
- cd22432
Location:42 → 105
- KH-I_HNRNPK_rpt1; first type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22433
Location:144 → 213
- KH-I_HNRNPK_rpt2; second type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins
- cd22434
Location:387 → 460
- KH-I_HNRNPK_rpt3; third type I K homology (KH) RNA-binding domain found in heterogeneous nuclear ribonucleoprotein K (hnRNP K) and similar proteins