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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_031822.2 RefSeqGene
- Range
-
5022..160993
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001006600.3 → NP_001006600.1 erbin isoform 7
See identical proteins and their annotated locations for NP_001006600.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks two consecutive exons in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (7) is shorter than isoform 1.
- Source sequence(s)
-
AB033051, AC025442, BC144075, BP199825, BP342103, BU145959, DA723889, DR000131, N67861
- Consensus CDS
-
CCDS34172.1
- UniProtKB/TrEMBL
-
A0A8V8TP09
- Related
- ENSP00000422015.1, ENST00000508515.2
- Conserved Domains (4) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1212 → 1297
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
NM_001253697.2 → NP_001240626.1 erbin isoform 1
See identical proteins and their annotated locations for NP_001240626.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AB033051, AC025442, AF276423, BC144075, BP342103, DR000131, N67861
- Consensus CDS
-
CCDS58953.1
- UniProtKB/Swiss-Prot
- A0AVR1, B4E3F1, B7ZLV9, E7EQW9, E9PCR8, Q1RMD0, Q86W38, Q96RT1, Q9NR18, Q9NW48, Q9ULJ5
- UniProtKB/TrEMBL
-
Q1RMC9
- Related
- ENSP00000284037.4, ENST00000284037.10
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1321 → 1407
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
NM_001253698.2 → NP_001240627.1 erbin isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two exons in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AB033051, AC025442, AK304693, BC144075, BP342103, DR000131, N67861
- Consensus CDS
-
CCDS58954.1
- UniProtKB/TrEMBL
-
Q1RMC9
- Related
- ENSP00000370325.2, ENST00000380938.6
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1280 → 1341
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
NM_001253699.2 → NP_001240628.1 erbin isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks an exon and includes an alternate exon in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (8) is longer than isoform 1.
- Source sequence(s)
-
AB033051, AC025442, BC144075, BP342103, DR000131, N67861
- Consensus CDS
-
CCDS58952.1
- UniProtKB/TrEMBL
-
Q1RMC9
- Related
- ENSP00000426632.1, ENST00000506030.6
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1328 → 1414
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
NM_001253701.2 → NP_001240630.1 erbin isoform 9
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) uses an alternate splice site and lacks an exon in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (9) is shorter than isoform 1.
- Source sequence(s)
-
AB033051, AC025442, BC050692, BC144075, BP342103, DR000131, N67861
- Consensus CDS
-
CCDS58951.1
- UniProtKB/TrEMBL
-
Q1RMC9
- Related
- ENSP00000422766.1, ENST00000511297.5
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1276 → 1362
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
NM_018695.4 → NP_061165.1 erbin isoform 2
See identical proteins and their annotated locations for NP_061165.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an exon in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AB033051, AC025442, BC126464, BC144075, BP342103, DR000131, N67861
- Consensus CDS
-
CCDS3990.1
- UniProtKB/TrEMBL
-
Q1RMC9
- Related
- ENSP00000370330.2, ENST00000380943.6
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1280 → 1366
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p14 Primary Assembly
- Range
-
65926575..66082546
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047417376.1 → XP_047273332.1 erbin isoform X1
-
XM_047417378.1 → XP_047273334.1 erbin isoform X3
-
XM_047417380.1 → XP_047273336.1 erbin isoform X5
- UniProtKB/Swiss-Prot
- A0AVR1, B4E3F1, B7ZLV9, E7EQW9, E9PCR8, Q1RMD0, Q86W38, Q96RT1, Q9NR18, Q9NW48, Q9ULJ5
-
XM_047417382.1 → XP_047273338.1 erbin isoform X7
-
XM_047417384.1 → XP_047273340.1 erbin isoform X9
-
XM_047417377.1 → XP_047273333.1 erbin isoform X2
- Related
- ENSP00000425728.2, ENST00000511671.6
-
XM_047417379.1 → XP_047273335.1 erbin isoform X4
- UniProtKB/TrEMBL
-
A0A8V8TPC7
- Related
- ENSP00000514083.1, ENST00000699005.1
-
XM_047417381.1 → XP_047273337.1 erbin isoform X6
-
XM_047417383.1 → XP_047273339.1 erbin isoform X8
-
XM_047417385.1 → XP_047273341.1 erbin isoform X10
- UniProtKB/TrEMBL
-
A0A8V8TML4
- Related
- ENSP00000514089.1, ENST00000699010.1
-
XM_005248554.4 → XP_005248611.1 erbin isoform X1
See identical proteins and their annotated locations for XP_005248611.1
- UniProtKB/TrEMBL
-
Q1RMC9
- Conserved Domains (5) summary
-
- cd00116
Location:48 → 209
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd00992
Location:1369 → 1455
- PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
- sd00033
Location:24 → 47
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:368 → 411
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:322 → 380
- LRR_8; Leucine rich repeat
-
XM_047417386.1 → XP_047273342.1 erbin isoform X11
Alternate T2T-CHM13v2.0
Genomic
-
NC_060929.1 Alternate T2T-CHM13v2.0
- Range
-
66748417..66903759
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054352922.1 → XP_054208897.1 erbin isoform X1
-
XM_054352925.1 → XP_054208900.1 erbin isoform X3
-
XM_054352927.1 → XP_054208902.1 erbin isoform X5
- UniProtKB/Swiss-Prot
- A0AVR1, B4E3F1, B7ZLV9, E7EQW9, E9PCR8, Q1RMD0, Q86W38, Q96RT1, Q9NR18, Q9NW48, Q9ULJ5
-
XM_054352929.1 → XP_054208904.1 erbin isoform X7
-
XM_054352931.1 → XP_054208906.1 erbin isoform X9
-
XM_054352924.1 → XP_054208899.1 erbin isoform X2
-
XM_054352926.1 → XP_054208901.1 erbin isoform X4
-
XM_054352928.1 → XP_054208903.1 erbin isoform X6
-
XM_054352930.1 → XP_054208905.1 erbin isoform X8
-
XM_054352932.1 → XP_054208907.1 erbin isoform X10
- UniProtKB/TrEMBL
-
A0A8V8TML4
-
XM_054352923.1 → XP_054208898.1 erbin isoform X1
-
XM_054352933.1 → XP_054208908.1 erbin isoform X11