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    CNR2 cannabinoid receptor 2 [ Homo sapiens (human) ]

    Gene ID: 1269, updated on 10-Dec-2024

    Summary

    Official Symbol
    CNR2provided by HGNC
    Official Full Name
    cannabinoid receptor 2provided by HGNC
    Primary source
    HGNC:HGNC:2160
    See related
    Ensembl:ENSG00000188822 MIM:605051; AllianceGenome:HGNC:2160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CB2; CX5; CB-2
    Summary
    The cannabinoid delta-9-tetrahydrocannabinol is the principal psychoactive ingredient of marijuana. The proteins encoded by this gene and the cannabinoid receptor 1 (brain) (CNR1) gene have the characteristics of a guanine nucleotide-binding protein (G-protein)-coupled receptor for cannabinoids. They inhibit adenylate cyclase activity in a dose-dependent, stereoselective, and pertussis toxin-sensitive manner. These proteins have been found to be involved in the cannabinoid-induced CNS effects (including alterations in mood and cognition) experienced by users of marijuana. The cannabinoid receptors are members of family 1 of the G-protein-coupled receptors. [provided by RefSeq, Jul 2008]
    Expression
    Biased expression in lymph node (RPKM 3.7), spleen (RPKM 3.4) and 4 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See CNR2 in Genome Data Viewer
    Location:
    1p36.11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (23870515..23913362, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (23705612..23750778, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (24197005..24239852, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376861 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:24151920-24152788 Neighboring gene alpha-L-fucosidase 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:24191742-24192941 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 427 Neighboring gene uncharacterized LOC124904841 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 378 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 379 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 381 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 380 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 382 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 428 Neighboring gene BTB domain containing 6 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 383 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:24239664-24240178 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 384 Neighboring gene microRNA 378f Neighboring gene uncharacterized LOC124903877 Neighboring gene H3 histone pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env Upregulation of the human proteins CCL2, CX3CL1, IL-1beta, and CXCL10 by HIV-1 gp120 involves CB2 receptor in mesencephalic neuronal/glial culture model PubMed
    env CB1 or CB2 receptor agonists significantly inhibit HIV-1 gp120-induced decrease proliferation and increase apoptosis of human neural progenitor cells (hNPCs), indicating that CB1 or CB2 receptors are required for the effects of gp120 on hNPCs PubMed
    env HIV-1 gp120-induced synapse loss is inhibited by activation of CB2 receptor PubMed
    Tat tat CB1 and CB2 endocannabinoid receptors are involved in HIV-1 Tat-induced cleavage of PARP1 and CASP3 in retinal cells PubMed
    tat Treatment with cannabinoids inhibits HIV-1 Tat-enhanced attachment of U937 cells to collagen IV, laminin, or ECM1 proteins, which is linked to the cannabinoid receptor type 2 and the modulation of beta1-integrin and actin distribution PubMed
    tat HIV-1 Tat upregulates the expression of CB1 and CB2 cannabinoid receptors in retinal cells, which is suppressed by endocannabinoids, N-arachidonoylethanolamide and 2-arachidonoylglycerol PubMed
    tat CB(2) cannabinoid receptor 2 is involved in HIV-1 Tat-mediated macrophage migration PubMed
    tat HIV-1 Tat-mediated activation of the CB2R leads to altered expression and compartmentation of the beta-chemokine receptor CCR-3 PubMed
    capsid gag Monocyte-derived macrophages treated during differentiation with a CB2 specific agonist show decrease in p24 levels PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables cannabinoid receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extrinsic component of cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in perikaryon IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
     
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cannabinoid receptor 2
    Names
    cannabinoid receptor 2 (macrophage)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001841.3NP_001832.1  cannabinoid receptor 2

      See identical proteins and their annotated locations for NP_001832.1

      Status: REVIEWED

      Source sequence(s)
      AL590609, BC069722, X74328
      Consensus CDS
      CCDS245.1
      UniProtKB/Swiss-Prot
      C6ES44, P34972, Q4VBK8, Q5JRH7, Q6B0G7, Q6NSY0
      Related
      ENSP00000363596.4, ENST00000374472.5
      Conserved Domains (1) summary
      cd15341
      Location:34310
      7tmA_CB2; cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      23870515..23913362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011540629.4XP_011538931.1  cannabinoid receptor 2 isoform X1

      See identical proteins and their annotated locations for XP_011538931.1

      UniProtKB/Swiss-Prot
      C6ES44, P34972, Q4VBK8, Q5JRH7, Q6B0G7, Q6NSY0
      Conserved Domains (1) summary
      cd15341
      Location:34310
      7tmA_CB2; cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. XM_047444833.1XP_047300789.1  cannabinoid receptor 2 isoform X1

      UniProtKB/Swiss-Prot
      C6ES44, P34972, Q4VBK8, Q5JRH7, Q6B0G7, Q6NSY0
    3. XM_017000261.3XP_016855750.1  cannabinoid receptor 2 isoform X1

      UniProtKB/Swiss-Prot
      C6ES44, P34972, Q4VBK8, Q5JRH7, Q6B0G7, Q6NSY0
      Conserved Domains (1) summary
      cd15341
      Location:34310
      7tmA_CB2; cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      23705612..23750778 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054334280.1XP_054190255.1  cannabinoid receptor 2 isoform X1

    2. XM_054334279.1XP_054190254.1  cannabinoid receptor 2 isoform X1

    3. XM_054334278.1XP_054190253.1  cannabinoid receptor 2 isoform X1